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Binding Affinity predictor
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Protein Engineering
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PPI-Affinity
A tool to predict and optimize the binding affinity of protein-peptide and protein-protein complexes
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Job name
Email
Modeller license key
Structure
PDB structure with minimum two chains
Amino acids sequences
FASTA file with the amino acids sequences of the chains (in the same order) contained in the structure
see Help
Ligand
Chain ID representing the ligand in the structure
Mutants
FASTA file with the derivatives of the ligand
Number of output derivatives
Number of derivatives to show in the output (an empty field means that all candidates are desired)
Output order
The best binders first
The worst binders first
Applicability Domain (AD)
Output only complexes in AD 100th
Output only complexes in AD 1st-99th
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